IngentaConnect Comparative sequence analysis of four myosin heavy chain isoforms...

Authors: CHIKUNI, Koichi¹; MUROYA, Susumu¹; TANABE, yo-ichi¹; NAKAJIMA, Ikuyo¹

Source: Animal Science Journal, Volume 73, Number 4, August 2002 , pp. 257-262(6)

Abstract:

A nucleotide sequence including the full coding region for the myosin heavy chain (MyHC) slow isoform was determined from the longissimus skeletal muscle. The deduced amino acid sequence was 1935 residues, which was the same length as the human and rat MyHC-slow isoforms. The porcine MyHC-slow isoform showed 97.6% and 97.4% amino acid identities to the human and rat isoforms on their entire regions, respectively. The functional regions were also highly conserved among mammalian MyHC-slow isoforms. Amino acid substitutions between the porcine MyHC-slow and MyHC-fast isoforms were concentrated on the functional regions. Loop 1, the controlling region of nucleotide binding and release, was conserved among the fast isoforms, but not between the slow and fast isoforms. Loop 2, a part of the actin binding region, was not conserved among any of the isoform types, and the most substitutions in this region were found in the slow isoform. The myosin essential light chain binding region was conserved among the fast isoforms, except for some substitutions in the 2b isoform, but was clearly different in the slow isoform. The myosin regulatory light chain binding region was conserved among the fast isoforms, but not between the slow and fast isoforms. These results indicate that the functional difference between the porcine MyHC-slow and -fast isoforms are controlled by the sequence diversity at the four functional regions compared.

Keywords: complete sequence; isoforms; myosin heavy chain; slow isoform

Document Type: Research article

DOI: 10.1046/j.1344-3941.2002.00035.x

Affiliations: 1: National Institute of Livestock and Grassland Science, Tsukuba Norin-kenkyu-danchi, Ibaraki-ken, Japan

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Comparative sequence analysis of four myosin heavy chain isoforms expressed in porcine skeletal muscles: Sequencing and characterization of the porcine myosin heavy chain slow isoform